
A study in MalariaWorld last week found a link between malaria and nutrition. ‘The gut microbiome in early life predicts malaria susceptibility’ by Dutton et al of the University of Florida studied infants from birth in malaria-endemic eastern Democratic Republic of Congo. Infant faecal samples were collected at six weeks, and at three, six and 12 months of age, as well as at passive malaria sick and post-treatment visits, and were subjected to full length 16S rRNA sequencing.
The study found significant differences in relative abundance of a number of bacterial species between those infants who never had a malaria visit from those who did, and malaria episodes resulted in gut dysbiosis. Healthy gut-associated Bifidobacterium breve and its metabolic partner Cutibacterium avidum, along with Megasphaera micronuciformis were associated with malaria resistance, whereas bacteria previously associated with pathogenic processes, including Streptococcus salivarius, Klebsiella pneumoniae, and Rothia mucilaginosa, associated with malaria susceptibility.
The faecal samples collected were tested using digital polymerase chain reaction (PCR) techniques to identify bacteria. These data were correlated with detailed survey information of both mothers and infants and malaria status. There are no other clear signals from the data collected. But clearly, the infants microbiome is linked to the quality of nutrition they receive. We reported another study linking gut microbiome to malaria in April 2026.
There is opportunity to investigate microbiome-targeted strategies to support resistance to malaria in early life. It would be useful to identify the foods eaten by breast feeding mothers and by growing infants that encourage development of malaria resistant guts.








